Agricultural Microbiology

Agricultural microbiology is the study of microorganisms that are associated with agriculture, including those involved in plant growth, soil fertility, and the suppression or spread of plant and animal diseases.
The discipline investigates the roles of bacteria, fungi, actinomycetes, protozoa, and viruses in processes such as nitrogen fixation, organic matter decomposition, and nutrient cycling, which are critical to sustainable crop production.
It emphasizes the symbiotic relationships between beneficial microbes and plants, for example the association of nitrogen-fixing bacteria with leguminous plants and mycorrhizal fungi with various crops, enhancing nutrient uptake and plant resilience.
Historical developments in agricultural microbiology trace back to the pioneering observations of microorganisms by Antonie van Leeuwenhoek and were later advanced by scientists such as Louis Pasteur, Robert Koch, Sergei Winogradsky, and Martinus Beijerinck who established the roles of microbes in soil chemistry and plant pathology.
The field also encompasses the study of microbial interactions in the rhizosphere and phyllosphere, with current research utilizing molecular techniques like metagenomics to characterize complex microbial communities and their impacts on plant health and soil quality.
Agricultural microbiology plays a crucial role in developing biofertilizers and biopesticides as alternatives to chemical inputs, thereby reducing environmental pollution and enhancing sustainable farming practices.
Its applications extend to plant disease diagnosis and management, where understanding microbial dynamics helps in predicting outbreaks and formulating integrated pest management strategies.
Advances in the field have led to innovations that improve soil structure, increase crop yield, and reduce production costs, all of which are vital for ensuring global food security in the face of changing climatic conditions and growing populations.

Microbial degradation of cellulose – Enzymes, Steps, Mechanisms

• Last Updated August 12, 2025 • 14 revisions • 37 min readby Editorial Team

What is cellulose? (C6H10O5)n Cellulose Molecular Weight/ Molar Mass 162.1406 g/mol Density 1.5 g/cm³ Appears White powder Melting Point 260–270 °C Properties of cellulose Structure of cellulose What are cellulases? Cellulases are a group of enzymes that catalyze the hydrolysis of cellulose, a complex polysaccharide present in plant cell walls. These enzymes are largely produced … Read more

Organic Waste Recycling – Definition, Characteristics, Methods, Steps, Significance

• Edited by Sourav Pan • Last Updated July 15, 2025 • 4 revisions • 12 min readby Editorial Team

Organic waste adds to greenhouse gas emissions, soil and water contamination, and other environmental problems. Composting, anaerobic digestion, and vermicomposting are among the methods that can be used to manage organic waste. What is Organic waste? Organic waste refers to any waste material that originates from living organisms or their byproducts. This waste can be … Read more

Microbial Degradation of Lignin – Microorganisms, Enzymes, Steps, Mechanisms, Challenges

• Edited by Sourav Pan • Last Updated July 15, 2025 • 2 revisions • 15 min readby Editorial Team

What is lignin? Lignin is a complex, high-molecular-weight polymer made mostly of phenolic compounds. It is found in the cell walls of vascular plants, especially in the secondary cell wall during the development of xylem, phloem fibres, and sclerenchyma cells, which give the plant strength, support, and waterproofing. It is made up of three main … Read more

Phyllosphere Microorganisms – Examples, Factors, Effects

• Published on July 6, 2025 • 24 min readby Editorial Team

The phyllosphere refers to the entirety of a plant’s above-ground surface, which provides a habitat for microorganisms, particularly in the aerial components such as leaves, stems, flowers, and fruits. Phyllosphere Microorganisms – These are microbiological entities that inhabit the aerial surfaces of plants, particularly the leaf surface (phylloplane). What is Phyllosphere? Phyllosphere – the aerial … Read more

Soil Formation (Pedogenesis)- Definition, Factors, Process, Steps, Examples

• Last Updated July 6, 2025 • 2 revisions • 16 min readby Editorial Team

What is Pedogenesis? Pedogenesis is the natural process of soil formation resulting from the interplay of physical, chemical, biological, and climatic elements throughout time. Chronology – In 1883, Vasily Dokuchaev posited that soil is a product of climate, vegetation, parent material, and temporal factors. In 1941, Hans Jenny established the CLORPT model—Climate, Organisms, Relief, Parent … Read more

Microbial degradation of hemicellulose – Definition, Enzymes, Steps, Mechanisms

• Published on July 5, 2025 • 13 min readby Editorial Team

Hemicellulose is a group of polysaccharides found in plant cell walls, associated with cellulose and lignin. Unlike cellulose which is a linear polymer of glucose, hemicellulose is a branched, amorphous polymer of various sugar monomers like xylose, mannose, galactose, rhamnose and arabinose. It acts as a matrix component that binds with cellulose fibrils and lignin, … Read more

Microbial Degradation of Chitin – Microorganisms, Enzymes, Steps, Mechanisms

• Published on July 5, 2025 • 10 min readby Editorial Team

Microbial Degradation of Chitin - Definition, Microorganisms, Enzymes, Steps, Mechanisms

What is chitin? Structure of chitin What are Chitinases? Chitinases are enzymes that catalyze the hydrolysis of the β-1,4-glycosidic bonds in chitin They belong to the glycosyl hydrolase family with EC number 3.2.1.14 Two main types exist based on cleavage mode They are produced by bacteria, fungi, plants and some animals for nutrition, defense or … Read more

Tomato Spotted Wilt Virus (TSWV) – Life Cycle, Structure, Symptoms, Vector

• Last Updated July 27, 2025 • 7 revisions • 45 min readby Sourav Pan

Tomato Spotted Wilt Virus (TSWV) - Structure, Symptoms, Management

Tomato Spotted Wilt Virus, often called TSWV for short, is one of those frustrating problems that can really throw a wrench into your gardening plans or hit farmers hard. It’s not just a tomato issue either – this nasty virus has a surprisingly broad appetite, targeting everything from peppers and lettuce to popular flowers like … Read more

Rhizosphere – Definition, Bacteria, Structure, Importance

• Last Updated July 27, 2025 • 8 revisions • 28 min readby Sourav Pan

Rhizosphere - Definition, Microflora, Structure, Importance

What is Rhizosphere? The rhizosphere is the small area of soil around plant roots that is directly affected by root secretions and the microbes that live there. Usually goes about one millimeter from the root surface and includes soil that sticks to the roots and can be easily shook off. Root exudates and rhizodeposition: Roots … Read more

Dutch elm disease (DED) – Cause, Lifecycle, Spread, Management

• Last Updated July 27, 2025 • 6 revisions • 19 min readby Sourav Pan

What is Dutch elm disease (DED)? A deadly fungal disease that infects elm trees and stops water from flowing through their vessels, causing them to wilt and die. The main cause is Ophiostoma ulmi and Ophiostoma novo-ulmi. Dutch phytopathologists Schwarz and Buisman found it in the Netherlands in the early 1920s. It was brought to … Read more